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lower."}]},{"id":"menwomen13regional","shortTitle":"Men & women","title":"Men and women · 13 regional traditions","subtitle":"d’Huy 2017 Appendix A","nTaxa":13,"rowUnit":"cultural-area tradition","question":"Does the same opposition tree favor an African or European root placement?","summary":"The 13-area opposition matrix, shown under all-trait and variable-trait conditioning.","scopeNote":"Thirteen cultural-area aggregates test the same opposition tree. The Balkans label does not establish an origin in ancient Greece. The published East African three-way root is separate from the fitted edge comparisons.","methodologyNote":"Appendix A retains 28 positional columns despite a source note about F45A; columns are not assigned invented motif names. Scored East Africa and Balkans placements are operational edge comparisons. The best and chosen-Balkans options denote the same edge in the all-trait model.","sources":[{"label":"d’Huy 2017 source record","url":"https://www.academia.edu/33211748/2017_Matriarchy_and_Prehistory_A_Statistical_Method_for_Testing_an_Old_Theory_Les_Cahiers_de_lAARS_19_159_170"}],"models":[{"id":"all-traits","label":"All 28 traits","nTraits":28,"note":"Uses every coded trait, including constant traits. All scored candidates share the same neighbor-joining mismatch tree.","likelihoodModel":"Mk","methodologyNote":"one unrooted topology independently obtained as mismatch NJ and transcribed Figure 1; union of starts from both initial branch geometries; scored candidates share this topology and likelihood model. The underlying directional root model is a conditional root-edge diagnostic, not geographic-origin evidence.","topology":"mismatch","topologySha256":"f70023556ebcb35d874f933008ea4daf123f8994c6282019ff8a0cd0022d1360","sourceMatrixSha256":"58a52a23441be139f8d95aad5a9493b818e0b9b426b95ecef6ece891e0fd4d71","resultFileSha256":"11b5d43233dfd701997b7b90416a86ebdb3367efd7e27cd482a1ca771ed90019","candidates":[{"id":"best","label":"Best · Balkans","kind":"best","best":true,"edgeId":13,"logLikelihood":-197.09939211731523,"deltaFromBest":0.0,"tree":{"name":"ROOT_EDGE_13","children":[{"name":"ROOT_E013","children":[{"name":"Balkans / Europe","rawTaxon":"BALKANS_EURASIA","region":"Balkans / Europe","children":[]}]},{"name":"I014","children":[{"name":"I016","children":[{"name":"I017","children":[{"name":"Arctic America","rawTaxon":"ARCTIC_AMERICA","region":"Arctic America","children":[]},{"name":"I019","children":[{"name":"Southern Asia","rawTaxon":"SOUTHERN_ASIA_EURASIA","region":"Southern Asia","children":[]},{"name":"Northeastern India","rawTaxon":"NORTHEASTERN_INDIA_EURASIA","region":"Northeastern India","children":[]}]}]},{"name":"Western Africa","rawTaxon":"WESTERN_AFRICA","region":"Western Africa","children":[]}]},{"name":"I000","children":[{"name":"I001","children":[{"name":"Great Southwest America","rawTaxon":"GREAT_SOUTHWEST_AMERICA","region":"Great Southwest America","children":[]},{"name":"I003","children":[{"name":"I004","children":[{"name":"Chaco","rawTaxon":"CHACO_AMERICA","region":"Chaco","children":[]},{"name":"I006","children":[{"name":"Eastern Brazil","rawTaxon":"EASTERN_BRAZIL_AMERICA","region":"Eastern Brazil","children":[]},{"name":"I008","children":[{"name":"Southern Amazonia","rawTaxon":"SOUTHERN_AMAZONIA_AMERICA","region":"Southern Amazonia","children":[]},{"name":"Guiana","rawTaxon":"GUIANA_AMERICA","region":"Guiana","children":[]}]}]}]},{"name":"I011","children":[{"name":"Northwestern Amazonia","rawTaxon":"NORTHWESTERN_AMAZONIA_AMERICA","region":"Northwestern Amazonia","children":[]},{"name":"Melanesia","rawTaxon":"MELANESIA_OCEANIA","region":"Melanesia","children":[]}]}]}]},{"name":"Sudan / East Africa","rawTaxon":"SUDAN_EASTERN_AFRICA","region":"Sudan / East Africa","children":[]}]}]}]}},{"id":"published-african","label":"Published · E. 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Fitted options put the root on an edge of the same unrooted tree.","insight":"This is the published African-rooted tree. Select an African, European, or best-fitting comparison to explore the statistical reanalysis."},{"id":"african-reference","label":"African · East Africa","kind":"reference","best":false,"edgeId":22,"logLikelihood":-200.36275721676847,"deltaFromBest":-3.263365099453239,"tree":{"name":"ROOT_EDGE_22","children":[{"name":"ROOT_E022","children":[{"name":"Sudan / East Africa","rawTaxon":"SUDAN_EASTERN_AFRICA","region":"Sudan / East Africa","children":[]}]},{"name":"I000","children":[{"name":"I001","children":[{"name":"Great Southwest America","rawTaxon":"GREAT_SOUTHWEST_AMERICA","region":"Great Southwest America","children":[]},{"name":"I003","children":[{"name":"I004","children":[{"name":"Chaco","rawTaxon":"CHACO_AMERICA","region":"Chaco","children":[]},{"name":"I006","children":[{"name":"Eastern Brazil","rawTaxon":"EASTERN_BRAZIL_AMERICA","region":"Eastern Brazil","children":[]},{"name":"I008","children":[{"name":"Southern Amazonia","rawTaxon":"SOUTHERN_AMAZONIA_AMERICA","region":"Southern Amazonia","children":[]},{"name":"Guiana","rawTaxon":"GUIANA_AMERICA","region":"Guiana","children":[]}]}]}]},{"name":"I011","children":[{"name":"Northwestern Amazonia","rawTaxon":"NORTHWESTERN_AMAZONIA_AMERICA","region":"Northwestern Amazonia","children":[]},{"name":"Melanesia","rawTaxon":"MELANESIA_OCEANIA","region":"Melanesia","children":[]}]}]}]},{"name":"I014","children":[{"name":"Balkans / Europe","rawTaxon":"BALKANS_EURASIA","region":"Balkans / Europe","children":[]},{"name":"I016","children":[{"name":"I017","children":[{"name":"Arctic America","rawTaxon":"ARCTIC_AMERICA","region":"Arctic America","children":[]},{"name":"I019","children":[{"name":"Southern Asia","rawTaxon":"SOUTHERN_ASIA_EURASIA","region":"Southern Asia","children":[]},{"name":"Northeastern India","rawTaxon":"NORTHEASTERN_INDIA_EURASIA","region":"Northeastern India","children":[]}]}]},{"name":"Western Africa","rawTaxon":"WESTERN_AFRICA","region":"Western Africa","children":[]}]}]}]}]},"reference":"african"},{"id":"european-reference","label":"Chosen · Balkans","kind":"reference","best":true,"edgeId":13,"logLikelihood":-197.09939211731523,"deltaFromBest":0.0,"tree":{"name":"ROOT_EDGE_13","children":[{"name":"ROOT_E013","children":[{"name":"Balkans / Europe","rawTaxon":"BALKANS_EURASIA","region":"Balkans / Europe","children":[]}]},{"name":"I014","children":[{"name":"I016","children":[{"name":"I017","children":[{"name":"Arctic America","rawTaxon":"ARCTIC_AMERICA","region":"Arctic America","children":[]},{"name":"I019","children":[{"name":"Southern Asia","rawTaxon":"SOUTHERN_ASIA_EURASIA","region":"Southern Asia","children":[]},{"name":"Northeastern India","rawTaxon":"NORTHEASTERN_INDIA_EURASIA","region":"Northeastern India","children":[]}]}]},{"name":"Western Africa","rawTaxon":"WESTERN_AFRICA","region":"Western Africa","children":[]}]},{"name":"I000","children":[{"name":"I001","children":[{"name":"Great Southwest America","rawTaxon":"GREAT_SOUTHWEST_AMERICA","region":"Great Southwest America","children":[]},{"name":"I003","children":[{"name":"I004","children":[{"name":"Chaco","rawTaxon":"CHACO_AMERICA","region":"Chaco","children":[]},{"name":"I006","children":[{"name":"Eastern Brazil","rawTaxon":"EASTERN_BRAZIL_AMERICA","region":"Eastern Brazil","children":[]},{"name":"I008","children":[{"name":"Southern Amazonia","rawTaxon":"SOUTHERN_AMAZONIA_AMERICA","region":"Southern Amazonia","children":[]},{"name":"Guiana","rawTaxon":"GUIANA_AMERICA","region":"Guiana","children":[]}]}]}]},{"name":"I011","children":[{"name":"Northwestern Amazonia","rawTaxon":"NORTHWESTERN_AMAZONIA_AMERICA","region":"Northwestern Amazonia","children":[]},{"name":"Melanesia","rawTaxon":"MELANESIA_OCEANIA","region":"Melanesia","children":[]}]}]}]},{"name":"Sudan / East Africa","rawTaxon":"SUDAN_EASTERN_AFRICA","region":"Sudan / East Africa","children":[]}]}]}]},"reference":"chosen-europe"}],"bestId":"best","referenceId":"published-african","tiedBestIds":["best","european-reference"],"insight":"The Balkans branch is the best-fitting root with all 28 traits; the East Africa comparison is 3.26 log-likelihood units lower. Correcting for trait selection changes the winner."},{"id":"variable-traits","label":"Selection-corrected · 26","nTraits":26,"note":"Uses only varying traits and corrects for that selection; this conditioning can change the best root. All scored candidates share the same neighbor-joining mismatch tree.","likelihoodModel":"Mkv","methodologyNote":"one unrooted topology independently obtained as mismatch NJ and transcribed Figure 1; union of starts from both initial branch geometries; scored candidates share this topology and likelihood model. The underlying directional root model is a conditional root-edge diagnostic, not geographic-origin evidence.","topology":"mismatch","topologySha256":"f70023556ebcb35d874f933008ea4daf123f8994c6282019ff8a0cd0022d1360","sourceMatrixSha256":"58a52a23441be139f8d95aad5a9493b818e0b9b426b95ecef6ece891e0fd4d71","resultFileSha256":"f819d7fe31d5cd95fde86dd1189af0e3fa27c4c91468ed3e3ac0517c70887687","candidates":[{"id":"best","label":"Best · South America","kind":"best","best":true,"edgeId":17,"logLikelihood":-186.51974038185602,"deltaFromBest":0.0,"tree":{"name":"ROOT_EDGE_17","children":[{"name":"I003","children":[{"name":"I011","children":[{"name":"Northwestern Amazonia","rawTaxon":"NORTHWESTERN_AMAZONIA_AMERICA","region":"Northwestern Amazonia","children":[]},{"name":"Melanesia","rawTaxon":"MELANESIA_OCEANIA","region":"Melanesia","children":[]}]},{"name":"I001","children":[{"name":"Great Southwest America","rawTaxon":"GREAT_SOUTHWEST_AMERICA","region":"Great Southwest America","children":[]},{"name":"I000","children":[{"name":"Sudan / East Africa","rawTaxon":"SUDAN_EASTERN_AFRICA","region":"Sudan / East Africa","children":[]},{"name":"I014","children":[{"name":"I016","children":[{"name":"I017","children":[{"name":"Arctic America","rawTaxon":"ARCTIC_AMERICA","region":"Arctic America","children":[]},{"name":"I019","children":[{"name":"Southern Asia","rawTaxon":"SOUTHERN_ASIA_EURASIA","region":"Southern Asia","children":[]},{"name":"Northeastern India","rawTaxon":"NORTHEASTERN_INDIA_EURASIA","region":"Northeastern India","children":[]}]}]},{"name":"Western Africa","rawTaxon":"WESTERN_AFRICA","region":"Western Africa","children":[]}]},{"name":"ROOT_E013","children":[{"name":"Balkans / Europe","rawTaxon":"BALKANS_EURASIA","region":"Balkans / Europe","children":[]}]}]}]}]}]},{"name":"I004","children":[{"name":"Chaco","rawTaxon":"CHACO_AMERICA","region":"Chaco","children":[]},{"name":"I006","children":[{"name":"Eastern Brazil","rawTaxon":"EASTERN_BRAZIL_AMERICA","region":"Eastern Brazil","children":[]},{"name":"I008","children":[{"name":"Southern Amazonia","rawTaxon":"SOUTHERN_AMAZONIA_AMERICA","region":"Southern Amazonia","children":[]},{"name":"Guiana","rawTaxon":"GUIANA_AMERICA","region":"Guiana","children":[]}]}]}]}]}},{"id":"published-african","label":"Published · E. 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Fitted options put the root on an edge of the same unrooted tree.","insight":"This is the published African-rooted tree. Select an African, European, or best-fitting comparison to explore the statistical reanalysis."},{"id":"african-reference","label":"African · East Africa","kind":"reference","best":false,"edgeId":9,"logLikelihood":-190.1084653287838,"deltaFromBest":-3.5887249469277833,"tree":{"name":"ROOT_EDGE_9","children":[{"name":"ROOT_E022","children":[{"name":"Sudan / East Africa","rawTaxon":"SUDAN_EASTERN_AFRICA","region":"Sudan / East Africa","children":[]}]},{"name":"I000","children":[{"name":"I001","children":[{"name":"Great Southwest America","rawTaxon":"GREAT_SOUTHWEST_AMERICA","region":"Great Southwest America","children":[]},{"name":"I003","children":[{"name":"I004","children":[{"name":"Chaco","rawTaxon":"CHACO_AMERICA","region":"Chaco","children":[]},{"name":"I006","children":[{"name":"Eastern Brazil","rawTaxon":"EASTERN_BRAZIL_AMERICA","region":"Eastern Brazil","children":[]},{"name":"I008","children":[{"name":"Southern Amazonia","rawTaxon":"SOUTHERN_AMAZONIA_AMERICA","region":"Southern Amazonia","children":[]},{"name":"Guiana","rawTaxon":"GUIANA_AMERICA","region":"Guiana","children":[]}]}]}]},{"name":"I011","children":[{"name":"Northwestern Amazonia","rawTaxon":"NORTHWESTERN_AMAZONIA_AMERICA","region":"Northwestern Amazonia","children":[]},{"name":"Melanesia","rawTaxon":"MELANESIA_OCEANIA","region":"Melanesia","children":[]}]}]}]},{"name":"I014","children":[{"name":"Balkans / Europe","rawTaxon":"BALKANS_EURASIA","region":"Balkans / Europe","children":[]},{"name":"I016","children":[{"name":"I017","children":[{"name":"Arctic America","rawTaxon":"ARCTIC_AMERICA","region":"Arctic America","children":[]},{"name":"I019","children":[{"name":"Southern Asia","rawTaxon":"SOUTHERN_ASIA_EURASIA","region":"Southern Asia","children":[]},{"name":"Northeastern India","rawTaxon":"NORTHEASTERN_INDIA_EURASIA","region":"Northeastern India","children":[]}]}]},{"name":"Western Africa","rawTaxon":"WESTERN_AFRICA","region":"Western Africa","children":[]}]}]}]}]},"reference":"african"},{"id":"european-reference","label":"Chosen · Balkans","kind":"reference","best":false,"edgeId":0,"logLikelihood":-186.84992914870972,"deltaFromBest":-0.3301887668536949,"tree":{"name":"ROOT_EDGE_0","children":[{"name":"ROOT_E013","children":[{"name":"Balkans / Europe","rawTaxon":"BALKANS_EURASIA","region":"Balkans / Europe","children":[]}]},{"name":"I014","children":[{"name":"I016","children":[{"name":"I017","children":[{"name":"Arctic America","rawTaxon":"ARCTIC_AMERICA","region":"Arctic America","children":[]},{"name":"I019","children":[{"name":"Southern Asia","rawTaxon":"SOUTHERN_ASIA_EURASIA","region":"Southern Asia","children":[]},{"name":"Northeastern India","rawTaxon":"NORTHEASTERN_INDIA_EURASIA","region":"Northeastern India","children":[]}]}]},{"name":"Western Africa","rawTaxon":"WESTERN_AFRICA","region":"Western Africa","children":[]}]},{"name":"I000","children":[{"name":"I001","children":[{"name":"Great Southwest America","rawTaxon":"GREAT_SOUTHWEST_AMERICA","region":"Great Southwest America","children":[]},{"name":"I003","children":[{"name":"I004","children":[{"name":"Chaco","rawTaxon":"CHACO_AMERICA","region":"Chaco","children":[]},{"name":"I006","children":[{"name":"Eastern Brazil","rawTaxon":"EASTERN_BRAZIL_AMERICA","region":"Eastern Brazil","children":[]},{"name":"I008","children":[{"name":"Southern Amazonia","rawTaxon":"SOUTHERN_AMAZONIA_AMERICA","region":"Southern Amazonia","children":[]},{"name":"Guiana","rawTaxon":"GUIANA_AMERICA","region":"Guiana","children":[]}]}]}]},{"name":"I011","children":[{"name":"Northwestern Amazonia","rawTaxon":"NORTHWESTERN_AMAZONIA_AMERICA","region":"Northwestern Amazonia","children":[]},{"name":"Melanesia","rawTaxon":"MELANESIA_OCEANIA","region":"Melanesia","children":[]}]}]}]},{"name":"Sudan / East Africa","rawTaxon":"SUDAN_EASTERN_AFRICA","region":"Sudan / East Africa","children":[]}]}]}]},"reference":"chosen-europe"}],"bestId":"best","referenceId":"published-african","insight":"The variable-trait best edge is slightly ahead of the Balkans comparison by 0.33 units; East Africa is 3.59 units lower."}]},{"id":"cosmic47versions","shortTitle":"Cosmic Hunt","title":"Cosmic Hunt · 47 versions","subtitle":"d’Huy 2013 Berber-sky matrix","nTaxa":47,"rowUnit":"story version","question":"Which recorded version lies on the best-fitting root edge under each conditioning?","summary":"A 47-version, 93-mytheme tree with all-93 and variable-88 root-edge models.","scopeNote":"This is the recovered 2013 47-version matrix, not the unrecovered 2018 175/176-version dataset. Region coverage is uneven, and five source '?' cells are treated as unknown.","methodologyNote":"The source does not define the five literal '?' cells, so analyses treat them as unknown/missing. Evenki 3 is the published source choice; Copper is the best-scoring edge in both retained model views.","sources":[{"label":"d’Huy 2013 source record","url":"https://hal.science/halshs-00932197"}],"graph":{"format":"node-edge-v1","root":47,"sourceDisplayRoot":null,"displayAnchor":null,"topologySha256":"906c4f4ddb45a0d2355a004dfae60648f667ddd63bdf19e465a78bbaa9621510","taxa":[{"id":0,"label":"Cherokee","rawTaxon":"Cherokee","region":"Northeastern America"},{"id":1,"label":"Nlaka'pamux","rawTaxon":"Nlaka'pamux","region":"American Coast-Plateau / British Columbia"},{"id":2,"label":"Twana","rawTaxon":"Twana","region":"American Coast-Plateau / British Columbia"},{"id":3,"label":"Snohomish","rawTaxon":"Snohomish","region":"American Coast-Plateau / British Columbia"},{"id":4,"label":"Meskwaki","rawTaxon":"Meskwaki","region":"Northeastern America"},{"id":5,"label":"Micmac","rawTaxon":"Micmac","region":"Northeastern America"},{"id":6,"label":"Mohawk","rawTaxon":"Mohawk","region":"Northeastern 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Structural '-' cells are masked per character and are not recoded as a state.","topology":"shared full-character descriptive tree","topologySha256":"7f5ecf322441c4753129d571a23b1de5e275f361a9ad0325c52e2b25c5ca9491","sourceMatrixSha256":"12cb83122cafb2171420e5eea13393196f40cb30db2af5f3d699b1f0a96fb866","candidates":[{"id":"unrooted","label":"Unrooted connections","kind":"unrooted","best":false,"edgeId":null,"logLikelihood":null,"deltaFromBest":null},{"id":"best","label":"Best · Norway","kind":"best","best":true,"edgeId":266,"logLikelihood":-3774.5881881086007,"deltaFromBest":0.0},{"id":"chosen-basque","label":"Chosen · Basque","kind":"reference","best":false,"edgeId":11,"logLikelihood":-3778.4532251812802,"deltaFromBest":-3.86503707267957,"reference":"chosen-europe"},{"id":"caucasus-georgia","label":"Caucasus · Georgia","kind":"reference","best":false,"edgeId":44,"logLikelihood":-3775.541116185697,"deltaFromBest":-0.9529280770962032,"reference":"caucasus"},{"id":"caucasus-armenia","label":"Caucasus · Armenia","kind":"reference","best":false,"edgeId":330,"logLikelihood":-3774.902906308378,"deltaFromBest":-0.3147181997774169,"reference":"caucasus"},{"id":"african-egypt","label":"African · Egypt","kind":"reference","best":false,"edgeId":20,"logLikelihood":-3780.320105528019,"deltaFromBest":-5.731917419418551,"reference":"african"},{"id":"african-kabylia","label":"African · Kabylia","kind":"reference","best":false,"edgeId":21,"logLikelihood":-3780.3083467331553,"deltaFromBest":-5.720158624554642,"reference":"african"},{"id":"african-south-africa","label":"African · South Africa","kind":"reference","best":false,"edgeId":225,"logLikelihood":-3778.645880796115,"deltaFromBest":-4.057692687514191,"reference":"african"}],"bestId":"best","referenceId":"chosen-basque","insight":"The 74-event scan favors the AB30_Nw Norway edge; the Armenian reference is only 0.31 units lower, while Basque is 3.87 lower."},{"id":"binary-19","label":"19 complete events","nTraits":19,"note":"Keeps the 19 events coded for every version, removing structural gaps.","likelihoodModel":"Mk","methodologyNote":"The graph is the accepted full-character descriptive topology; the complete-19 fit is a conditional binary sensitivity on the same fixed topology. The underlying directional root model is a conditional root-edge diagnostic. Structural '-' cells are removed by retaining only the 19 events coded for every version.","topology":"shared full-character descriptive tree","topologySha256":"7f5ecf322441c4753129d571a23b1de5e275f361a9ad0325c52e2b25c5ca9491","sourceMatrixSha256":"12cb83122cafb2171420e5eea13393196f40cb30db2af5f3d699b1f0a96fb866","candidates":[{"id":"unrooted","label":"Unrooted connections","kind":"unrooted","best":false,"edgeId":null,"logLikelihood":null,"deltaFromBest":null},{"id":"best","label":"Best · Italian cluster","kind":"best","best":true,"edgeId":295,"logLikelihood":-913.3716196045813,"deltaFromBest":0.0},{"id":"tied-best-adjacent","label":"Tied best · Italian / Rhodo","kind":"tied-best","best":true,"edgeId":338,"logLikelihood":-913.3716196057604,"deltaFromBest":-1.1791598808486015e-09,"reference":"tied-best"},{"id":"chosen-basque","label":"Chosen · Basque","kind":"reference","best":false,"edgeId":11,"logLikelihood":-918.9813731287934,"deltaFromBest":-5.609753524212124,"reference":"chosen-europe"},{"id":"caucasus-georgia","label":"Caucasus · Georgia","kind":"reference","best":false,"edgeId":44,"logLikelihood":-920.0053714107352,"deltaFromBest":-6.633751806153896,"reference":"caucasus"},{"id":"caucasus-armenia","label":"Caucasus · Armenia","kind":"reference","best":false,"edgeId":330,"logLikelihood":-919.7223051523517,"deltaFromBest":-6.350685547770468,"reference":"caucasus"},{"id":"african-egypt","label":"African · Egypt","kind":"reference","best":false,"edgeId":20,"logLikelihood":-918.4525387074738,"deltaFromBest":-5.080919102892494,"reference":"african"},{"id":"african-kabylia","label":"African · Kabylia","kind":"reference","best":false,"edgeId":21,"logLikelihood":-919.0524376820888,"deltaFromBest":-5.680818077507524,"reference":"african"},{"id":"african-south-africa","label":"African · South Africa","kind":"reference","best":false,"edgeId":225,"logLikelihood":-917.9351959339962,"deltaFromBest":-4.5635763294149,"reference":"african"}],"bestId":"best","referenceId":"chosen-basque","tiedBestIds":["best","tied-best-adjacent"],"insight":"The complete-19 scan has two Italian placements tied to the displayed precision."}]}]}